| 1984 | 6 Organ Concertos | Georg Friedrich Handel; The Amsterdam Baroque Orchestra, Ton Koopman | | 1 |
| 1985 | Brandenburgische Konzerte 1-3-4 | J.S. Bach; The Amsterdam Baroque Orchestra, Ton Koopman | | 2 |
| 1986 | The 6 Organ Concertos | Haydn; Amsterdam Baroque Orchestra, Ton Koopman | | 1 |
| 1986 | Brandenburgische Konzerte 5-6-2 | J.S. Bach; The Amsterdam Baroque Orchestra, Ton Koopman | | 2 |
| 1986 | Concertos pour orgue | Haendel; Ton Koopman, Amsterdam Baroque Orchestra | | 2 |
| 1987 | 3 Quartets / Harpsichord Concerto | Carl Philipp Emanuel Bach; Ton Koopman, Wiel Peeters, Wilbert Hazelzet, Richte van der Meer, Amsterdam Baroque Orchestra | | 1 |
| 1988 | Buxtehude - Cantates | Dieterich Buxtehude ; Knabenchor Hannover, Amsterdam Baroque Orchestra & Ton Koopman | | 1 |
| 1988 | Cantates | Buxtehude; Schlick, Frimmer, Chance, Jacobs, Pregardien, Kooy, Hannover Knabenchor, The Amsterdam Baroque Orchestra, Ton Koopman | | 1 |
| 1988 | Cantate "Membra Jesu Nostri" | Dieterich Buxtehude ; Knabenchor Hannover, Amsterdam Baroque Orchestra & Ton Koopman | | 1 |
| 1989 | Orchestral Suites Nos. 1-4 | J. S. Bach; The Amsterdam Baroque Orchestra, Ton Koopman | | 3 |
| 1990 | Requiem | Mozart; Amsterdam Baroque Orchestra, Ton Koopman | | 1 |
| 1990 | 4 Symphonies | C.P.E. Bach; Amsterdam Baroque Orchestra, Ton Koopman | 5 | 1 |
| 1990 | Harpsicord Concertos BWV 1052, 1053, 1056, 1057 | Johann Sebastian Bach; Ton Koopman, Amsterdam Baroque Orchestra | | 1 |
| 1990 | Klavierkonzerte, BWV 1052, 1057, 1059 | Johann Sebastian Bach; Amsterdam Baroque Orchestra, Ton Koopman | | 1 |
| 1990 | Marche - Serenade 'Haffner' | Amsterdam Baroque Orchestra | | 1 |
| 1991 | Brandenburg Concerti 1-3 / Triple Concerto | Johann Sebastian Bach; Ton Koopman, Amsterdam Baroque Orchestra | | 1 |
| 1991 | Concertos for 2, 3 and 4 Keyboards, Volume 2 | Johann Sebastian Bach; Amsterdam Baroque Orchestra, Ton Koopman | | 1 |
| 1991 | Harpsichord Concertos, BWV 1060, 1061, 1062, 1065 | Johann Sebastian Bach; Amsterdam Baroque Orchestra, Ton Koopman | | 2 |
| 1991 | Harpsichord Concertos BWV 1053, 1054, 1056, 1058 | Johann Sebastian Bach; Amsterdam Baroque Orchestra, Ton Koopman | | 1 |
| 1991 | Symphonies Nos 17, 18, 19, 22, 32 | Mozart; The Amsterdam Baroque Orchestra, Ton Koopman | | 1 |
| 1992 | Messiah | Handel; The Sixteen, The Amsterdam Baroque Orchestra, Ton Koopman | | 1 |
| 1993 | Matthäus Passion, BWV 244 | Johann Sebastian Bach; Ton Koopman, Amsterdam Baroque Orchestra, De Nederlandse Bachvereniging & Sacramentskoor Breda | | 2 |
| 1994 | Johannes Passion BWV245 | Johann Sebastian Bach; Koor Nederlandse Bachvereinigung, Amsterdam Baroque Orchestra, Ton Koopman | | 1 |
| 1995 | Messe in h-moll, BWV 232 | Johann Sebastian Bach; Amsterdam Baroque Orchestra, Ton Koopman | | 1 |
| 1995 | Complete Cantatas, Volume 1 | Bach; The Amsterdam Baroque Orchestra & Choir, Ton Koopman | | 2 |
| 1995 | Concertos Brandebourgeois No. 1, 2, 3 & 5 | Johann Sebastian Bach; Amsterdam Baroque Orchestra, Ton Koopman | | 1 |
| 1995 | Krönungsmesse / Exsultate, jubilate / Ave verum corpus / Vesperae solennes de confessore | Mozart; Schlick, Von Magnus, Agnew, Mesdag, The Amsterdam Baroque Orchestra & Choir, Ton Koopman | | 1 |
| 1996 | Le Quattro Stagioni (The Four Seasons) | Antonio Vivaldi; Amsterdam Baroque Orchestra, Andrew Manze, Ton Koopman | | 3 |
| 1996 | Complete Cantatas, Volume 3 | Johann Sebastian Bach; Amsterdam Baroque Orchestra, Amsterdam Baroque Choir & Ton Koopman | | 2 |
| 1996 | Complete Cantatas, Volume 2 | Bach; The Amsterdam Baroque Orchestra & Choir, Ton Koopman | | 2 |
| 1996 | Complete Cantatas, Volume 4 | Bach; The Amsterdam Baroque Orchestra & Choir, Ton Koopman | | 2 |
| 1996 | Symphonies nos. 39 & 40 | Mozart; The Amsterdam Baroque Orchestra, Ton Koopman | | 2 |
| 1996 | Weihnachtsoratorium BWV 248 | Johann Sebastian Bach; Amsterdam Baroque Orchestra, Amsterdam Baroque Choir, Ton Koopman | | 1 |
| 1997 | 2 Flute Concertos Concerto for two Harpsichords | C.P.E. Bach; Ton Koopman, The Amsterdam Baroque Orchestra, Konrad Hünteler, Tini Mathot | | 1 |
| 1997 | 3 Flute Concertos | C.P.E. Bach; Ton Koopman, The Amsterdam Baroque Orchestra, Konrad Hünteler | | 1 |
| 1997 | 4 Orchestral Suites | Bach; Amsterdam Baroque Orchestra, Ton Koopman | | 1 |
| 1997 | 4 Organ Concerto | Handel; Ton Koopman, Amsterdam Baroque Orchestra | | 1 |
| 1997 | Complete Cantatas, Volume 5 | Bach; The Amsterdam Baroque Orchestra & Choir, Ton Koopman | | 2 |
| 1997 | Membra Jesu Nostri | Buxtehude; The Amsterdam Baroque Orchestra, Ton Koopman | | 1 |
| 1997 | Organ Concertos, op. IV & op. VII | Handel; Ton Koopman, The Amsterdam Baroque Orchestra | | 1 |
| 1998 | Complete Cantatas, Volume 7 | Bach; The Amsterdam Baroque Orchestra & Choir, Ton Koopman | | 2 |
| 1998 | Complete Cantatas, Volume 6 | Johann Sebastian Bach; Ton Koopman, Amsterdam Baroque Orchestra | | 2 |
| 1998 | Easter Oratorio BWV 249 / Magnificat BWV 243 | Johann Sebastian Bach; Amsterdam Baroque Orchestra, Amsterdam Baroque Choir, Ton Koopman | | 1 |
| 1999 | Simply Baroque | Johann Sebastian Bach, Luigi Boccherini; Yo‐Yo Ma, Amsterdam Baroque Orchestra, Ton Koopman | | 3 |
| 1999 | Complete Cantatas, Volume 8 | Bach; The Amsterdam Baroque Orchestra & Choir, Ton Koopman | | 2 |
| 1999 | Complete Cantatas, Volume 9 | J.S. Bach; The Amsterdam Baroque Orchestra & Choir, Ton Koopman | | 2 |
| 1999 | Missa Salisburgensis | Biber; Amsterdam Baroque Orchestra and Choir, Ton Koopman | | 1 |
| 2000 | Simply Baroque II | Bach, Boccherini; Yo‐Yo Ma, Amsterdam Baroque Orchestra, Ton Koopman | | 3 |
| 2001 | Complete Cantatas, Volume 11 | Bach; The Amsterdam Baroque Orchestra & Choir, Ton Koopman | | 2 |
| 2001 | Complete Cantatas, Volume 12 | Bach; The Amsterdam Baroque Orchestra, Amsterdam Baroque Choir, Ton Koopman | | 2 |
| 2002 | Symphonies nos. 25, 31 "Paris" & 41 "Jupiter" | Wolfgang Amadeus Mozart; Amsterdam Baroque Orchestra, Ton Koopman | | 2 |
| 2003 | 6 Concerti Armonici | Van Wassenaer; The Amsterdam Baroque Orchestra, Ton Koopman | | 1 |
| 2003 | Cantatas, Volume 14 | J.S. Bach; The Amsterdam Baroque Orchestra & Choir, Ton Koopman | | 1 |
| 2003 | Complete Cantatas, Volume 13 | Bach; The Amsterdam Baroque Orchestra & Choir, Ton Koopman | | 1 |
| 2004 | Vivaldi’s Cello | Antonio Vivaldi; Amsterdam Baroque Orchestra, Yo‐Yo Ma, Ton Koopman | | 5 |
| 2004 | Brandenburg Concertos 4-6, BWV 1049-1051 / Orchestral Suite no. 2, BWV 1067 | J.S. Bach; Amsterdam Baroque Orchestra, Ton Koopman, Jean-Pierre Rampal | | 1 |
| 2004 | Symphonies 25, 29 & 33 | Wolfgang Amadeus Mozart; The Amsterdam Baroque Orchestra, Ton Koopman | | 1 |
| 2004 | Cantatas, Volume 17 | J.S. Bach; The Amsterdam Baroque Orchestra & Choir, Ton Koopman | | 1 |
| 2004 | Cantatas, Volume 15 | J.S. Bach; The Amsterdam Baroque Orchestra & Choir, Ton Koopman | | 1 |
| 2004 | Cantatas, Volume 16 | Johann Sebastian Bach; Amsterdam Baroque Orchestra, Amsterdam Baroque Choir, Ton Koopman | | 1 |
| 2005 | Complete Cantatas, Volume 10 | Johann Sebastian Bach; Amsterdam Baroque Orchestra, Amsterdam Baroque Choir, Ton Koopman | | 2 |
| 2005 | Cantatas Vol. 20 | Johann Sebastian Bach; Amsterdam Baroque Orchestra, Amsterdam Baroque Choir, Ton Koopman | | 1 |
| 2005 | Complete Cantatas, Volume18 | Bach; The Amsterdam Baroque Orchestra & Choir, Ton Koopman | | 1 |
| 2005 | Cantatas Vol. 19 | Johann Sebastian Bach; Amsterdam Baroque Orchestra, Amsterdam Baroque Choir, Ton Koopman | | 1 |
| 2006 | 250th Anniversary Edition: Symphonies | Mozart; Royal Concertgebouw Orchestra, Nikolaus Harnoncourt, Amsterdam Baroque Orchestra, Ton Koopman | | 1 |
| 2006 | Cantatas Vol. 22 | Johann Sebastian Bach; Amsterdam Baroque Orchestra, Amsterdam Baroque Choir, Ton Koopman | | 1 |
| 2006 | Cantatas Vol. 21 | Johann Sebastian Bach; Amsterdam Baroque Orchestra, Amsterdam Baroque Choir, Ton Koopman | | 1 |
| 2006 | Matthäus Passion | Johann Sebastian Bach, Ton Koopman, Amsterdam Baroque Orchestra, Amsterdam Baroque Choir | | 1 |
| 2007 | Opera Omnia II, Vocal Works 1: Wacht! Euch Zum Streit Gefasset Macht (Das Jüngste Gericht) | Dieterich Buxtehude; Ton Koopman, Amsterdam Baroque Orchestra, Amsterdam Baroque Choir | | 1 |
| 2007 | Opera Omnia V: Vocal Works 2 | Dietrich Buxtehude; Ton Koopman, Amsterdam Baroque Choir, Amsterdam Baroque Orchestra | | 1 |
| 2008 | Opera Omnia VII Vocal Works 3 | Dieterich Buxtehude; Ton Koopman, Amsterdam Baroque Choir, Amsterdam Baroque Orchestra | | 1 |
| 2008 | Dialogue Cantatas I | Johann Sebastian Bach; Amsterdam Baroque Orchestra & Choir, Ton Koopman | | 1 |
| 2008 | Kaffee-Kantate | Johann Sebastian Bach; Amsterdam Baroque Orchestra & Choir, Ton Koopman | | 1 |
| 2009 | New Year's Day Cantatas | Johann Sebastian Bach; Ton Koopman, Amsterdam Baroque Orchestra, Amsterdam Baroque Choir | | 1 |
| 2009 | Musikalisches Opfer, BWV 1079 | Johann Sebastian Bach; Members of the Amsterdam Baroque Orchestra, Ton Koopman | | 1 |
| 2009 | Whitsun Cantatas | Johann Sebastian Bach; Amsterdam Baroque Orchestra, Choir, Ton Koopman | | 1 |
| 2011 | Opera Omnia XI, Vocal Works 4 | Dieterich Buxtehude; Ton Koopman, Amsterdam Baroque Orchestra | | 1 |
| 2011 | Opera Omnia XIV, Vocal Works 5 | Dieterich Buxtehude, Ton Koopman, Amsterdam Baroque Choir, Amsterdam Baroque Orchestra | | 1 |
| 2012 | Opera Omnia XVI-Vocal Works: Membra Jesu Nostri | Dieterich Buxtehude; Ton Koopman, Amsterdam Baroque Orchestra, Amsterdam Baroque Choir, Siri Karoline Thornhill, Dorothee Wohlgemuth, Patrick Van Goethem, Jörg Dürmüller, Klaus Mertens | | 1 |
| 2013 | Opera Omnia XVII, Vocal Works 7 | Dieterich Buxtehude; Ton Koopman & Amsterdam Baroque Orchestra | | 1 |
| 2014 | Opera Omnia | Dieterich Buxtehude; Ton Koopman, Amsterdam Baroque Orchestra, Amsterdam Baroque Choir | | 1 |
| 2015 | Motets à double chœur | Marc‐Antoine Charpentier; Amsterdam Baroque Orchestra, Ton Koopman | | 1 |
| — | Opera Omnia XX, Vocal Works 10 | Dieterich Buxtehude; Ton Koopman, Amsterdam Baroque Choir, Amsterdam Baroque Orchestra | | 1 |
| — | Organ Concertos Hob. 18: 1& 2 / Harpsichord Concerto Hob. 18:1 | Haydn; Ton Koopman, Amsterdam Baroque Orchestra | | 1 |
