| 1975 | Kompositionen für Altus | Telemann, Christoph Bach, Buxtehude; Paul Esswood | | 1 |
| 1984 | Kantaten aus dem Alt-Bachschen Archiv | Johann Michael Bach, Georg Christoph Bach, Johann Christoph Bach; Capella Fidicinia, Hans Grüss | | 1 |
| 1986 | Die Familie Bach vor Johann Sebastian | Johann Michael Bach, Georg Christoph Bach, Johann Christoph Bach, Heinrich Bach;Musica Antiqua Köln | | 1 |
| 1994 | Motetten/Motets | Pachelbel, Johann Christoph & Johann Michael Bach; Cantus Cölln, Konrad Junghänel | | 1 |
| 1998 | Puyana Plays Bach | Johann Sebastian Bach, Johann Christoph Bach, Wilhelm Friedemann Bach; Rafael Puyana | | 1 |
| 1999 | German Church Cantatas and Arias | Dietrich Buxtehude, Johann Christoph Bach, Georg Philipp Telemann; René Jacobs, The Kuijken Consort, The Parnassus Ensemble | 4 | 1 |
| 2006 | English Classical Clarinet Concertos | John Mahon, Colin Lawson, The Parley of Instruments, Peter Holman, Michael Harris, Johann Christoph Bach & James Hook | | 1 |
| 2012 | Music for weddings and other festivities | Johann Sebastian Bach & Johann Christoph Bach & Georg Böhm | | 1 |
| 2015 | Motetten | Johann Bach, Johann Christoph Bach, Johann Michael Bach; Vox Luminis, Lionel Meunier | | 1 |
| 2015 | Oboe Quartets & Trio Sonatas | J.C. Bach, C.P.E. Bach, Mozart, Stamitz, Vanhal, Goldberg; Perlman, Zukerman, Still, Harrell, Eddy, Sanders | | 1 |
| 2017 | Complete Organ Music | Johann Michael Bach, Johann Christoph Bach; Stefano Molardi | | 1 |
| 2019 | Kantaten | Heinrich Bach, Johann Christoph Bach, Johann Michael Bach, Johann Sebastian Bach; Vox Luminis, Lionel Meunier | | 2 |
| 2021 | Lamento | Schütz, Schein, Scheidt, JC Bach, Geist, Sances, Tunder; Iestyn Davies, Fretwork | | 1 |
| 2022 | Sturm und Drang: The Germanic Sonata in the 18th century | C.P.E Bach, J.C Bach, Mozart, Haydn, Beethoven; Mario Raskin | | 1 |
| 2023 | Bach Generations | Johann Sebastian Bach, Johann Christoph Friedrich Bach, Gottfried Heinrich Stölzel, Carl Philipp Emanuel Bach, Johann Christoph Bach; Albrecht Mayer & Berliner Barock Solisten | | 2 |
| — | Bach: Welt, gute Nacht / John Eliot Gardiner | Johann Christoph Bach | | 1 |
| — | Geistliche Musik der Bach Familie, vol 5 | Johann Michael Bach, Georg Christoph Bach, Johann Christoph Bach; Capella Fidicinia, Hans Grüß | | 1 |
| — | Motetten der Bachfamilie | Johann Bach, Johann Christoph Bach, Johann Michael Bach; Philippe Herreweghe, Collegium Vocale Gent, Ricercar Consort, Johan Huys, Philippe Pierlot | | 1 |
