| 1994 | The Chromatic Persuaders | Mark Feldman / Lindsey Horner / Neal Kirkwood / Tom Rainey: The Chromatic Persuaders | | 1 |
| 2001 | The Shell Game | Tim Berne, Craig Taborn & Tom Rainey | | 1 |
| 2002 | Dedalo | Gianluigi Trovesi, Markus Stockhausen, Fulvio Maras, Tom Rainey, WDR Big Band Köln | | 1 |
| 2003 | Apparitions | Tony Malaby, Tom Rainey, Michael Sarin, Drew Gress | | 1 |
| 2004 | Ash and Tabula. Out Trios Volume Three | Nels Cline / Andrea Parkins / Tom Rainey | | 1 |
| 2005 | Romance Among The Fishes | Liam Noble / Phil Robson / Drew Gress / Tom Rainey | | 1 |
| 2007 | Downpour | Nels Cline / Andrea Parkins / Tom Rainey | | 2 |
| 2010 | Pool School | Tom Rainey | | 1 |
| 2012 | Nawora | Nabatov, Wogram, Rainey | | 1 |
| 2012 | Dig My Trane - Coltrane's Vanguard Years (1961-1962) | George Gruntz, NDR Bigband with Special Guest : Tom Rainey | | 1 |
| 2013 | Capricorn Climber | Kris Davis, Mat Maneri, Ingrid Laubrock, Trevor Dunn, Tom Rainey | | 2 |
| 2013 | Lark | Ingrid Laubrock, Tom Rainey, Kris Davis, Ralph Alessi | | 1 |
| 2014 | And Other Desert Towns | Ingrid Laubrock & Tom Rainey | | 2 |
| 2014 | Trio (New Haven) 2013 | Anthony Braxton - Tomas Fujiwara - Tom Rainey | | 1 |
| 2014 | Warrior | Richard Bonnet, Tony Malaby, Antonin Rayon & Tom Rainey | | 1 |
| 2017 | Behind Her Eyes | Peter Ehwald, Stefan Schultze, Tom Rainey | | 1 |
| 2018 | Utter | Ingrid Laubrock, Tom Rainey | | 1 |
| 2018 | Noise of Our Time | Ken Vandermark, Nate Wooley, Sylvie Courvoisier & Tom Rainey | | 1 |
| 2019 | Combobulated | Tom Rainey, Ingrid Laubrock & Mary Halvorson | | 1 |
| 2019 | Orbit | Stéphan Oliva, Sébastien Boisseau & Tom Rainey | | 2 |
| 2019 | Topaz | Robert Landfermann, Ingrid Laubrock, Achim Kaufmann, Tom Rainey | | 1 |
| 2019 | TISM | Ingrid Laubrock, Sylvie Courvoisier, Mark Feldman, Tom Rainey | | 1 |
| 2019 | Slip Sliding | Rob Burke, Ben Monder, Tom Rainey With Ben Grayson | | 1 |
| 2020 | Stir Crazy | Tom Rainey, Ingrid Laubrock | | 1 |
| 2020 | Plain | Simon Nabatov, Herb Robertson, Chris Speed, John Hébert & Tom Rainey | | 1 |
| 2021 | Untucked in Hannover | Obbligato | Tom Rainey, Ralph Alessi, Ingrid Laubrock, Jacob Sacks, Drew Gress | 2 | 1 |
| 2022 | THE ART SPIRIT - Ben Goldberg, Nels Cline, Tom Rainey Live at the Owl Music Parlor | Ben Goldberg, Nels Cline, Tom Rainey | | 1 |
| 2022 | No Es La Playa | Ingrid Laubrock, Brandon Lopez, Tom Rainey | | 1 |
| 2022 | Counterfeit Mars | Ingrid Laubrock & Tom Rainey | 2 | 1 |
| 2023 | Orbit - In-Visibility | Stéphan Oliva, Sébastien Boisseau & Tom Rainey | | 1 |
| 2023 | Implicatures | Sam Weinberg Trio with Chris Lightcap & Tom Rainey | | 1 |
| 2024 | Truth Seeker | Ivo Perelman, Mark Helias & Tom Rainey | | 1 |
| 2024 | Brink | Ingrid Laubrock & Tom Rainey | | 1 |
| — | Synapse | Brian Allen, Tony Malaby & Tom Rainey | | 1 |
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