| 1957 | Henry Cowell: Persian Set/Lou Harrison: Suite | Henry Cowell, Lou Harrison; Leopold Stokowski | | 1 |
| 1962 | Primitive Music of the World | Henry Cowell | | 1 |
| 1977 | Trio / Elegy / Hymn And Fuguing Tune No. 9 / Four Declamations With Return / Gravely And Vigorously | Chihara, Cowell; The Mirecourt Trio | | 1 |
| 1990 | Double Concerto for Violin and Cello with Javanese Gamelan | Lou Harrison, Cowell, Reale; The Mirecourt Trio | | 1 |
| 1992 | Classic Ultra-Modernist, Volume II | Henry Cowell; Continuum | | 1 |
| 1994 | Piano Music | Henry Cowell; Henry Cowell | | 1 |
| 1994 | Fiddler's Jig / Air & Scherzo / Concerto grosso / Hymn & Fuguing Tune no. 10 | Henry Cowell; Manhattan Chamber Orchestra, Richard Auldon Clark | | 1 |
| 1994 | Music for Strings | Henry Cowell; Northwest Chamber Orchestra of Seattle, Alun Francis | | 1 |
| 1994 | Persian Set | Henry Cowell; Manhattan Chamber Orchestra, Richard Auldon Clark | | 1 |
| 1994 | The Bad Boys! | George Antheil, Henry Cowell, Leo Ornstein; Steffen Schleiermacher | | 1 |
| 1995 | Set of Five / Four Combinations for Three Instruments / Hymn & Fuguing Tune no. 9 / Trio in Nine Short Movements | Henry Cowell; Trio Phoenix | | 1 |
| 1997 | Sorrel Doris Hays Plays the Piano Music of Henry Cowell | Henry Cowell; Sorrel Doris Hays | | 1 |
| 1997 | The Universal Flute | Henry Cowell; Rachel Rudich | | 1 |
| 1999 | Mosaic | Henry Cowell; Musicians Accord, Colorado String Quartet | | 1 |
| 1999 | New Music: Piano Compositions by Henry Cowell | Henry Cowell; Chris Brown, Sorrel Hays, Joseph Kubera, Sarah Cahill | | 1 |
| 2001 | American Piano Concertos | Henry Cowell | | 1 |
| 2001 | Dancing With Henry: New Discoveries in the Music of Henry Cowell | Henry Cowell | | 2 |
| 2001 | Music for Orchestra | Henry Cowell; Louisville Orchestra | | 1 |
| 2005 | A Continuum Portrait, Vol. 1: Quartet for Flute, Oboe, Cello and Harpsichord / Suite for Violin and Piano / Songs and Piano Pieces / Polyphonica / Irish Suite | Henry Cowell; Continuum, Cheryl Seltzer, Joel Sachs | | 1 |
| 2005 | A Continuum Portrait: Instrumental, Chamber & Vocal Music, Volume 2 | Henry Cowell; Continuum | | 1 |
| 2020 | Musique? | Tōru Takemitsu, Kaija Saariaho, Anahita Abbasi, Gavin Bryars, Henry Cowell, Luc Ferrari; Mahan Esfahani | | 2 |
| 2021 | Americascapes | Loeffler, Ruggles, Hanson, Cowell; Basque National Orchestra, Robert Treviño | | 1 |
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