| 1994 | Boulez Conducts Ligeti: Concertos for Cello / Violin / Piano | Ligeti; Ensemble InterContemporain, Jean-Guihen Queyras, Saschko Gawriloff, Pierre‐Laurent Aimard & Pierre Boulez | 3 | 2 |
| 1998 | Suites pour violoncelle seul | Britten; Jean‐Guihen Queyras | 5 | 2 |
| 2000 | Sur Incises / Messagesquisse / Anthèmes 2 | Boulez; Jean‐Guihen Queyras, Hae-Sun Kang, Ensemble intercontemporain, Pierre Boulez | 5 | 3 |
| 2001 | Kodály / Veress / Kurtág | Kodály, Veress, Kurtág; Jean‐Guihen Queyras, Alexandre Tharaud | | 3 |
| 2003 | Mauricio Kagel | Mauricio Kagel; Alexandre Tharaud, Bernold, Joulain, Le Roux, Le Sage, Marder, Queyras, Spaendonck | | 1 |
| 2004 | Cello Concertos | Joseph Haydn, Matthias Georg Monn; Jean‐Guihen Queyras, Freiburger Barockorchester, Petra Müllejans | | 3 |
| 2004 | Concerto pour violon et orchestre op.53 / Trio op.65 | Dvořák; Isabelle Faust, Jean‐Guihen Queyras, Alexander Melnikov, Prague Philharmonia, Jiří Bělohlávek | | 1 |
| 2005 | Cello Concerto / Dumky Trio | Dvořák; Jean‐Guihen Queyras, Isabelle Faust, Alexander Melnikov, The Prague Philharmonia, Jiří Bělohlávek | | 2 |
| 2006 | Arpeggione Sonata | Schubert, Webern, Berg; Jean‐Guihen Queyras, Alexandre Tharaud | | 1 |
| 2007 | Cello Suites | Johann Sebastian Bach; Jean‐Guihen Queyras | | 1 |
| 2007 | Piano Trios | Beethoven, Hummel; Staier, Sepec, Queyras | | 1 |
| 2008 | Klavierwerke & Kammermusik III | Robert Schumann; Gordan Nikolitch, François Leleux, Paul Meyer, Bruno Schneider, Antoine Tamestit, Jean‐Guihen Queyras, Éric Le Sage | | 1 |
| 2008 | Debussy / Poulenc | Claude Debussy, Francis Poulenc; Jean‐Guihen Queyras, Alexandre Tharaud | | 1 |
| 2011 | Cello Concertos | Vivaldi; Jean‐Guihen Queyras, Akademie für Alte Musik Berlin | | 1 |
| 2012 | Schumann Project: Complete Chamber Music with Piano | Schumann; Éric Le Sage, Berthaud, Braley, Coin, Julien-Laferrière, Kashimoto, Leleux, Meyer, Nikolitch, Pascal, Queyras, Salque, Schneider, Tamestit | | 2 |
| 2013 | Elgar: Cello Concerto / Tchaikovsky: Rococo Variations | Edward Elgar, Tchaikovsky; BBC Symphony Orchestra, Jiří Bělohlávek, Jean‐Guihen Queyras | | 1 |
| 2014 | Piano Trios op. 70 no. 2, op. 97 “Archduke” | Ludwig van Beethoven; Alexander Melnikov, Isabelle Faust, Jean‐Guihen Queyras | 5 | 2 |
| 2014 | Berg: Lyrische Suite / Schoenberg: Verklärte Nacht | Berg, Schoenberg; Ensemble Resonanz, Jean‐Guihen Queyras | | 1 |
| 2014 | Complete Works for Violoncello and Piano | Ludwig van Beethoven; Jean‐Guihen Queyras, Alexander Melnikov | | 1 |
| 2015 | Piano Concerto, op. 54 / Piano Trio no. 2, op. 80 | Robert Schumann; Alexander Melnikov, Freiburger Barockorchester, Pablo Heras-Casado, Jean‐Guihen Queyras, Isabelle Faust | | 2 |
| 2015 | Violin Concerto / Piano Trio no. 3 | Schumann; Isabelle Faust, Freiburger Barockorchester, Pablo Heras‐Casado, Alexander Melnikov, Jean‐Guihen Queyras | | 1 |
| 2016 | DoReMi / Speaking Drums / Cello Concerto Grosso | Péter Eötvös; Midori, Martin Grubinger, Jean‐Guihen Queyras, Orchestre philharmonique de Radio France, Péter Eötvös | | 2 |
| 2016 | Thrace (Sunday Morning Sessions) | Jean‐Guihen Queyras | | 1 |
| 2016 | Cello Concerto / Piano Trio no. 1 | Schumann; Jean‐Guihen Queyras, Freiburger Barockorchester, Pablo Heras-Casado, Alexander Melnikov, Isabelle Faust | | 1 |
| 2017 | Brahms: Cello Sonatas & Hungarian Dances | Johannes Brahms; Alexandre Tharaud, Jean‐Guihen Queyras | | 2 |
| 2018 | Les Trois Sonates / The Late Works | Claude Debussy; Isabelle Faust, Alexander Melnikov, Jean‐Guihen Queyras, Javier Perianes, Xavier de Maistre, Antoine Tamestit, Magali Mosnier, Tanguy De Williencourt | | 2 |
| 2018 | Cello Concertos / Symphony H.648 | Carl Philipp Emanuel Bach, Jean‐Guihen Queyras, Ensemble Resonanz, Riccardo Minasi | | 1 |
| 2018 | Six Sonatas For Cello And Basso Continuo | Antonio Vivaldi;Jean‐Guihen Queyras,Michael Behringer,Lee Santana,Christoph Dangel | | 1 |
| 2019 | Nomaden | Joël Bons; Jean‐Guihen Queyras, Atlas Ensemble, Ed Spanjaard | | 2 |
| 2020 | Violin Concerto / Verklärte Nacht | Arnold Schoenberg; Isabelle Faust, Swedish Radio Symphony Orchestra, Daniel Harding, Schreiber, Tamestit, Waskiewicz, Queyras, Poltéra | | 1 |
| 2021 | Triple Concerto / Piano Trio, op. 36 | Beethoven; Isabelle Faust, Jean‐Guihen Queyras, Alexander Melnikov, Freiburger Barockorchester, Pablo Heras‐Casado | | 2 |
| 2021 | Don Quixote; Till Eulenspiegel | Richard Strauss; Jean‐Guihen Queyras, Tabea Zimmermann, Gürzenich-Orchester Köln, François‐Xavier Roth | | 1 |
| 2022 | String Sextets | Brahms; Belcea Quartet, Tabea Zimmermann, Jean‐Guihen Queyras | | 2 |
| 2022 | Cello Sonatas | Chopin, Rachmaninoff; Jean‐Guihen Queyras, Alexander Melnikov | | 1 |
| 2022 | Invisible Stream | Raphaël Imbert, Jean‐Guihen Queyras, Pierre-François Blanchard, Sonny Troupé | | 1 |
| 2023 | Marin Marais | Marin Marais; Jean‐Guihen Queyras, Alexandre Tharaud | | 1 |
| 2023 | Piano Quartet & Quintet | Robert Schumann; Alexander Melnikov, Isabelle Faust, Antoine Tamestit, Jean-Guihen Queyras | | 1 |
