| 1989 | Violin Sonatas | Fauré, Debussy, Franck; Joshua Bell, Jean‐Yves Thibaudet | | 1 |
| 1990 | Chausson Concert / Ravel Trio | Ernest Chausson, Maurice Ravel; Joshua Bell, Jean‐Yves Thibaudet, Takács Quartet, Steven Isserlis | | 1 |
| 1991 | Franck: Symphonie / D'Indy: Symphonie sur un chant montagnard français | Franck, d’Indy; Thibaudet, Dutoit, Montréal | | 2 |
| 1991 | Piano Concertos 1 & 2 / Hungarian Fantasy / Totentanz | Franz Liszt; Orchestre symphonique de Montréal, Charles Dutoit, Jean‐Yves Thibaudet | | 2 |
| 1992 | L'Œuvre pour Piano Seul | Maurice Ravel; Jean‐Yves Thibaudet | | 1 |
| 1993 | Turangalîla‐Symphonie | Olivier Messiaen; Royal Concertgebouw Orchestra, Riccardo Chailly, Jean‐Yves Thibaudet, Takashi Harada | | 2 |
| 1993 | Mörike Lieder | Hugo Wolf; Brigitte Fassbaender, Jean‐Yves Thibaudet | | 1 |
| 1993 | Opera Transcriptions | Liszt; Jean‐Yves Thibaudet | | 1 |
| 1994 | Russian Cello Sonatas | Truls Mørk, Jean‐Yves Thibaudet, Lars Vogt | | 4 |
| 1994 | Piano Concerto no. 2 / Rhapsody on a Theme of Paganini | Rachmaninoff; Jean‐Yves Thibaudet, The Cleveland Orchestra, Vladimir Ashkenazy | | 2 |
| 1995 | Piano Concerto no. 2 / Paganini Rhapsody | Rachmaninov; Jean‐Yves Thibaudet, The Cleveland Orchestra, Vladimir Ashkenazy | | 1 |
| 1996 | Piano Concertos 1 & 3 | Rachmaninov; Jean‐Yves Thibaudet, The Cleveland Orchestra, Vladimir Ashkenazy | | 3 |
| 1996 | The Complete Works for Solo Piano, Volume 1 | Debussy; Jean‐Yves Thibaudet | | 2 |
| 1996 | Les Concertos pour piano | Ravel; Jean‐Yves Thibaudet, Dutoit, Montréal | | 2 |
| 1997 | Conversations with Bill Evans | Jean‐Yves Thibaudet | | 2 |
| 1998 | Piano Concerto No. 4 / Corelli Variations / Sonata No. 2 / Prelude in C-sharp minor | Rachmaninoff; Jean‐Yves Thibaudet, The Cleveland Orchestra, Vladimir Ashkenazy | | 1 |
| 1999 | Jean-Yves Thibaudet Plays Chopin | Fryderyk Chopin & Jean‐Yves Thibaudet | | 1 |
| 1999 | Reflections on Duke | Duke Ellington; Jean‐Yves Thibaudet | | 1 |
| 2000 | The Chopin I Love | Frédéric Chopin; Jean‐Yves Thibaudet | | 1 |
| 2000 | The Complete Works for Solo Piano, Volume 2: Images / Études | Debussy; Jean‐Yves Thibaudet | | 1 |
| 2000 | Piano Concertos | Grieg, Chopin; Rotterdam Philharmonic Orchestra, Valery Gergiev, Jean‐Yves Thibaudet | | 1 |
| 2001 | Night Songs | Debussy, Fauré, Strauss, Marx, Rachmaninov; Renée Fleming, Jean‐Yves Thibaudet | | 2 |
| 2001 | Piano Concertos 1 & 2 / Variations sérieuses / Rondo capriccioso | Mendelssohn; Jean‐Yves Thibaudet, Gewandhausorchester Leipzig, Herbert Blomstedt | | 1 |
| 2002 | The Magic of Satie | Erik Satie; Jean‐Yves Thibaudet | | 1 |
| 2003 | The Complete Solo Piano Music | Satie; Jean‐Yves Thibaudet | | 2 |
| 2005 | Russian Cello Sonatas | Jean‐Yves Thibaudet | | 1 |
| 2005 | Chausson: Concert / Ravel: Piano Trio / Fauré, Debussy, Franck: Violin Sonatas | Chausson, Ravel, Fauré, Debussy, Franck; Joshua Bell, Jean‐Yves Thibaudet | | 2 |
| 2007 | Piano Concertos 2 & 5 | Camille Saint‐Saëns; L’Orchestre de la Suisse Romande, Charles Dutoit, Jean‐Yves Thibaudet | | 1 |
| 2007 | Aria: Opera Without Words | Jean‐Yves Thibaudet | | 2 |
| 2007 | Works for Violin & Piano | Claus Ogermann; Yue Deng, Jean‐Yves Thibaudet | | 1 |
| 2008 | Cello Sonatas | Brahms, Grieg, Sibelius; Truls Mørk, Juhani Lagerspetz, Jean‐Yves Thibaudet | | 1 |
| 2010 | Opern-Paraphrasen und Transkriptionen | Franz Liszt; Jean‐Yves Thibaudet | | 1 |
| 2011 | Orchestral Works 7: Fantaisie for Piano and Orchestra / Deux danses / Rhapsodies for Clarinet and Saxophone | Debussy; Jean‐Yves Thibaudet, Emmanuel Ceysson, Alexandre Doisy, Paul Meyer, Orchestre National de Lyon, Jun Märkl | | 1 |
| 2012 | Debussy Piano Edition | Claude Debussy; Zoltán Kocsis, Klavierduo Kontarsky, Philippe Cassard,Jean‐Yves Thibaudet | | 1 |
| 2016 | Lieder | Liszt; Brigitte Fassbaender, Jean‐Yves Thibaudet | | 1 |
| 2017 | Symphonies nos. 1 and 2 | Bernstein; Jennifer Johnson Cano, Jean‐Yves Thibaudet, Baltimore Symphony Orchestra, Marin Alsop | | 1 |
| 2021 | Carte blanche | Jean‐Yves Thibaudet | | 1 |
| 2022 | Sonatas for Piano & Violin | Ludwig van Beethoven; Midori, Jean‐Yves Thibaudet | | 1 |
| 2023 | Night After Night (Music from the Movies of M. Night Shyamalan) | James Newton Howard & Jean‐Yves Thibaudet | | 1 |
| — | Debussy Preludes (Livres I Et II): The Complete Works For Solo Piano Vol. I | Debussy, Jean-Yves Thibaudet | | 1 |
| — | Valse brillante | Jean‐Yves Thibaudet | | 1 |
