| 1995 | Symbol Systems | Matthew Shipp | | 1 |
| 1995 | Symbol Systems | Matthew Shipp | | 1 |
| 1996 | Cama de terra | Ivo Perelman + Matthew Shipp, William Parker | | 1 |
| 1997 | Bendito Of Santa Cruz | Ivo Perelman With Matthew Shipp | | 1 |
| 1999 | Brazilian Watercolour | Ivo Perelman with Matthew Shipp, Rashied Ali, Guilherme Franco, Cyro Baptista | | 2 |
| 1999 | Magnetism | Matthew Shipp | | 1 |
| 2001 | Songs | Matthew Shipp | | 1 |
| 2002 | Nu Bop | Matthew Shipp | | 1 |
| 2003 | Antipop Consortium vs. Matthew Shipp | Antipop Consortium vs. Matthew Shipp | | 2 |
| 2003 | Equilibrium | Matthew Shipp | 1 | 1 |
| 2004 | Harmony and Abyss | Matthew Shipp | | 1 |
| 2005 | Chamber Trio | Mark O'Leary / Mat Maneri / Matthew Shipp | | 1 |
| 2005 | Phenomena of Interference | Steve Dalachinsky & Matthew Shipp | | 1 |
| 2006 | One | Matthew Shipp | | 1 |
| 2006 | Scotty Hard's Radical Reconstructive Surgery | John Medeski & Matthew Shipp | | 1 |
| 2007 | Abbey Road Duos | Evan Parker / Matthew Shipp | | 1 |
| 2007 | Piano Vortex | Matthew Shipp | | 1 |
| 2008 | SpaceShipp | J. Spaceman & Matthew Shipp | | 1 |
| 2010 | 4D | Matthew Shipp | | 1 |
| 2011 | Art of the Improviser | Matthew Shipp | | 1 |
| 2011 | Cosmic Lieder | Darius Jones & Matthew Shipp | | 1 |
| 2011 | Knives From Heaven | Matthew Shipp, William Parker, Beans, HPrizm | | 1 |
| 2012 | The Foreign Legion | Ivo Perelman, Matt Shipp, Gerald Cleaver | | 1 |
| 2013 | Serendipity | Perelman | Shipp | Parker | Cleaver | | 1 |
| 2013 | Rex, Wrecks & XXX | Evan Parker - Matthew Shipp | | 1 |
| 2013 | Enigma | Perelman, Shipp, Dickey & Cleaver | | 1 |
| 2014 | Book of Sound | Ivo Perelman | Matthew Shipp | William Parker | | 1 |
| 2014 | Alternating Current | Jeff Cosgrove / Matthew Shipp / William Parker | | 2 |
| 2016 | Cactus | Bobby Kapp / Matthew Shipp | | 1 |
| 2017 | Heptagon | Ivo Perelman, Matthew Shipp, William Parker, Bobby Kapp | | 2 |
| 2017 | Scalene | Ivo Perelman, Matthew Shipp, Joe Hertenstein | | 1 |
| 2017 | Vessel in Orbit | Dickey / Maneri / Shipp | | 1 |
| 2018 | Oneness | Perelman, Shipp | | 1 |
| 2018 | Zero | Matthew Shipp | | 1 |
| 2019 | Near Disaster | Jeff Cosgrove | Matthew Shipp | William Parker | | 1 |
| 2019 | Ineffable Joy | Ivo Perelman, Matthew Shipp, William Parker, Bobby Kapp | | 1 |
| 2020 | Amalgam | Ivo Perelman • Matthew Shipp | | 2 |
| 2020 | The Piano Equation | Matthew Shipp | | 1 |
| 2020 | Welcome Adventure! Vol. 1 | Daniel Carter, Matthew Shipp, William Parker, Gerald Cleaver | | 3 |
| 2020 | Shamanism | Ivo Perelman • Matthew Shipp • Joe Morris | | 1 |
| 2021 | Garden of Jewels | Ivo Perelman Trio | Ivo Perelman, Matthew Shipp & Hamid Drake | 2 | 1 |
| 2021 | Reels | Matthew Shipp & Whit Dickey | | 1 |
| 2021 | Re-Union | William Parker - Matthew Shipp | | 2 |
| 2021 | Music Frees Our Souls, Vol. 1 | Francisco Mela feat. Matthew Shipp and William Parker | | 4 |
| 2021 | Village Mothership | Whit Dickey, William Parker, Matthew Shipp | | 3 |
| 2021 | Codebreaker | Matthew Shipp | | 2 |
| 2022 | Flow Of Everything | Michael Bisio & Matthew Shipp | | 1 |
| 2022 | Old Stories | Chad Fowler • Matthew Shipp | | 2 |
| 2022 | Welcome Adventure! Vol. 2 | Daniel Carter, Matthew Shipp, William Parker, Gerald Cleaver | | 3 |
| 2022 | Pathways | Gordon Grdina, Mark Helias & Matthew Shipp | | 1 |
| 2022 | Live at Scholes Street Studio | Stephen Gauci, Francisco Mela, William Parker, Matthew Shipp | | 2 |
| 2022 | Alien Skin | Chad Fowler, Ivo Perelman, Zoh Amba, Matthew Shipp, William Parker & Steve Hirsh | | 2 |
| 2022 | The New Syntax | Matthew Shipp & Mark Helias | | 1 |
