| Matthew Passion | Johann Sebastian Bach; Dunedin Consort & Players, John Butt, Nicholas Mulroy, Matthew Brook | 3×Hybrid SACD | 38 + 34 + 29 | | Linn Records | CKD 313 | 691062031325 |
| Acis & Galatea | Georg Friedrich Händel; Susan Hamilton, Nicholas Mulroy, Thomas Hobbs, Nicholas Hurndall Smith, Matthew Brook, Dunedin Consort & Players, John Butt | Digital Media | 29 | | Linn Records | CKD 319 | |
| Acis & Galatea | Georg Friedrich Händel; Susan Hamilton, Nicholas Mulroy, Thomas Hobbs, Nicholas Hurndall Smith, Matthew Brook, Dunedin Consort & Players, John Butt | Hybrid SACD (CD layer) | 29 | | Linn Records | STUD65 004 | 691062031929 |
| St John Passion | Bach; Polyphony, Orchestra of the Age of Enlightenment, Stephen Layton, Ian Bostridge, Neil Davies, Carolyn Sampson, Iestyn Davies, Nicholas Mulroy, Roderick Williams | 2×CD | 20 + 23 | | Hyperion | CDA67901/2 | 034571179018 |
| St John Passion | Bach; Polyphony, Orchestra of the Age of Enlightenment, Stephen Layton, Ian Bostridge, Neil Davies, Carolyn Sampson, Iestyn Davies, Nicholas Mulroy, Roderick Williams | 2×Digital Media | 20 + 23 | | Hyperion | CDA67901/2 | |
| Choral Works | Stravinsky; Choir of St. Mary's Cathedral, Edinburgh, Duncan Ferguson, Ruby Hughes, Nicholas Mulroy, Scottish Chamber Orchestra Soloists | CD | 18 | | Delphian | DCD34164 | 801918341649 |
| Choral Works | Stravinsky; Choir of St. Mary's Cathedral, Edinburgh, Duncan Ferguson, Ruby Hughes, Nicholas Mulroy, Scottish Chamber Orchestra Soloists | Digital Media | 18 | | Delphian | | |
| Messiah, HWV 56 | Georg Friedrich Händel; R. Redmond, D. Guillon, N. Mulroy, M. Winckhler, La Capella Reial de Catalunya, Le Concert des Nations, Manfredo Kraemer, Jordi Savall | 2×Digital Media | 26 + 27 | | Alia Vox | | |
| Schubert, An Evening of Songs | Nicholas Mulroy & Pawel Siwczak | CD | 6 | | Bach Club | XA2102 | 198002090447 |
