| 1988 | Concerti für Bläser und Streicher | Antonio Vivaldi; Concerto Köln | | 1 |
| 1991 | Giulio Cesare | Haendel; René Jacobs, Concerto Köln, Jennifer Larmore, Barbara Schlick, Bernarda Fink, Marianne Rørholm, Derek Lee Ragin, Furio Zanasi, Dominique Visse, Olivier Lallouette | | 3 |
| 1991 | 4 Sinfonien | Joseph Martin Kraus; Concerto Köln | | 1 |
| 1991 | Concertos for Oboe, Flute-Harp, Clarinet | W. A. Mozart; Concerto Köln | | 1 |
| 1991 | Weihnachts-Oratorium | Johann Sebastian Bach; Vokalensemble Frankfurt, Concerto Köln, Ralf Otto | | 2 |
| 1992 | Sinfonien, Vol. 2: Symphonie funèbre | Joseph Martin Kraus; Concerto Köln | | 1 |
| 1994 | 3 Sinfonien | Gaetano Brunetti; Concerto Köln | | 1 |
| 1994 | Concerti Grossi | Locatelli; Concerto Köln | | 2 |
| 1995 | 5 Symphonies | Johann Baptist Vanhal; Concerto Köln | | 1 |
| 1995 | Piano Concertos | Dussek; Concerto Köln, Andreas Staier | | 1 |
| 1995 | Piano Concertos Nos. 9 "Jeunehomme" & 17 | Mozart, Andreas Staier, Concerto Köln | | 1 |
| 1996 | Cleopatra & Cesare | Carl Heinrich Graun; Janet Williams, Iris Vermillion, Lynne Dawson, Robert Gambill, Concerto Köln, René Jacobs | | 1 |
| 1997 | Symphonies, vol. II | Antonio Rosetti; Concerto Köln | | 1 |
| 1997 | The Complete String Symphonies | Mendelssohn; Concerto Köln | | 1 |
| 1998 | Concerti | Francesco Durante; Concerto Köln | | 2 |
| 1998 | Concerto for Violin, Piano and Strings in D minor / Concerto for Piano and Strings in A minor | Mendelssohn; Andreas Staier, Rainer Kussmaul, Concerto Köln | | 1 |
| 1999 | Così fan tutte | Mozart; Véronique Gens, Bernarda Fink, Werner Güra, Marcel Boone, Pietro Spagnoli, Graciela Oddone, Concerto Köln, René Jacobs | | 1 |
| 1999 | Così fan tutte | Wolfgang Amadeus Mozart; Graciela Oddone, Pietro Spagnoli, Marcel Boone, Werner Güra, Bernarda Fink, Véronique Gens, Concerto Köln, René Jacobs | | 1 |
| 1999 | Piano Concertos nos. 2 & 3 | John Field; Andreas Staier, Concerto Köln, David Stern | | 1 |
| 2000 | Symphonies | Eberl; Concerto Köln | | 1 |
| 2001 | Lost Objects | Gordon, Lang, Wolfe; Bang on a Can, Concerto Köln, RIAS Kammerchor, DJ Spooky | 5 | 1 |
| 2001 | Symphonies | Leopold Kozeluch; Concerto Köln | | 2 |
| 2002 | Diabelli Variations | Ludwig van Beethoven; Uri Caine, Concerto Köln | | 1 |
| 2003 | Dream of the Orient | Concerto Köln, Sarband | | 3 |
| 2003 | Symphonies | Gossec; Concerto Köln | | 1 |
| 2004 | Le Nozze di Figaro | Wolfgang Amadeus Mozart; Véronique Gens, Patrizia Ciofi, Angelika Kirchschlager, Lorenzo Regazzo, Simon Keenlyside, Concerto Köln, René Jacobs | | 2 |
| 2004 | Symphonien nos. 6 & 7 | Johann Wilhelm Wilms; Concerto Köln | | 3 |
| 2005 | Saul | Georg Friedrich Haendel; Rosemary Joshua, Emma Bell, Lawrence Zazzo, Jeremy Ovenden, Gidon Saks, RIAS Kammerchor, Concerto Köln, René Jacobs | | 3 |
| 2005 | The Waltz: Ecstasy and Mysticism | Concerto Köln, Sarband | | 1 |
| 2006 | 8 Symphonies | Antonio Rosetti; Concerto Köln | | 1 |
| 2006 | Mozart | Wolfgang Amadeus Mozart; Concerto Köln | | 2 |
| 2007 | Il divino boemo | Josef Mysliveček; Concerto Köln | | 1 |
| 2008 | Amoureuses | Mozart, Haydn, Gluck; Patricia Petibon, Daniel Harding, Concerto Köln | | 1 |
| 2008 | Wassermusik & Sinfonien | Händel; Concerto Köln | | 1 |
| 2009 | Symphonies | Henri-Joseph Rigel; Concerto Köln | | 1 |
| 2010 | The Orchestral Suites | Bach; Concerto Köln | | 1 |
| 2011 | The Concerto Köln Christmas Album | Concerto Köln | | 1 |
| 2011 | Violin Concertos | Bach; Giuliano Carmignola, Concerto Köln | | 3 |
| 2012 | Bach: Magnificat / Händel: Dixit Dominus | Johann Sebastian Bach, Georg Friedrich Händel; Chor des Bayerischen Rundfunks, Concerto Köln, Peter Dijkstra | | 1 |
| 2013 | Bel Canto: From Monteverdi to Verdi | Simone Kermes, Concerto Köln, Christoph M. Mueller | | 1 |
| 2014 | El Maestro Farinelli | Pablo Heras‐Casado, Concerto Köln | | 1 |
| 2014 | Brandenburg Concertos | Johann Sebastian Bach; Concerto Köln | | 1 |
| 2014 | Violin Concertos | Joseph Haydn; Midori Seiler, Concerto Köln | | 1 |
| 2016 | Johannes-Passion | Bach; Julian Prégardien, Tareq Nazmi, Christina Landshamer, Ulrike Malotta, Tilman Lichdi, Krešimir Stražanac, Chor des Bayerischen Rundfunks, Concerto Köln, Peter Dijkstra | | 1 |
| 2016 | The Four Seasons | Vivaldi; Shunsuke Sato, Concerto Köln | | 1 |
| 2017 | Opera Arias | Carl Heinrich Graun; Julia Lezhneva, Concerto Köln, Mikhail Antonenko | | 1 |
| 2018 | La Venezia di Anna Maria | Vivaldi; Midori Seiler, Concerto Köln | | 1 |
| 2020 | Vivaldi | Vivaldi; Martin Fröst, Concerto Köln | | 1 |
| 2021 | Mirrors | Jeanine De Bique, Concerto Köln, Luca Quintavalle | | 1 |
| 2022 | Die Jahreszeiten | Joseph Haydn; Ilse Eerens, Werner Güra, André Morsch, Orpheus Vokalensemble, Concerto Köln Academy, Marcus Creed | | 1 |
