| 1970 | Bruhns: L'œuvre d'orgue / Hanff: Les six chorals | Nicolaus Bruhns, Johann Nicolaus Hanff; Michel Chapuis | | 1 |
| 1977 | L'intégrale de l'œuvre pour orgue | Nikolaus Bruhns; Helmut Winter | | 1 |
| 1991 | Orgelwerke / Organ Works | Lübeck, Scheidt, Bruhns; Helmut Walcha | | 1 |
| 1993 | Piet Kee plays Bruhns & Buxtehude | Nicolaus Bruhns, Dieterich Buxtehude; Piet Kee | | 1 |
| 1996 | The Arp Schnitger Organ at St. Jakobi, Hamburg | Scheidemann, Schildt, Bruhns, Böhm, Bach; Gustav Leonhardt | | 1 |
| 2002 | Complete Organ Works | Nicolaus Bruhns; Lorenzo Ghielmi | | 1 |
| 2005 | Complete Organ Works | Nicolaus Bruhns, Georg Dietrich Leyding; Friedhelm Flamme | | 1 |
| 2005 | King of Instruments: The Art of Gillian Weir, Vol. 2 | Clérambault, Bruhns; Gillian Weir | | 1 |
| 2008 | Christ lag in Todesbanden | Scheidemann, Weckmann, Tunder, Buxtehude, Böhm, Bruhns, Bach; Johannes Strobl | | 1 |
| 2014 | Complete Organ Music | Bruhns; Adriano Falcioni | | 2 |
| 2019 | Bach / Bruhns / Buxtehude / de Grigny / Vivaldi | Bach, Bruhns, Buxtehude, de Grigny, Vivaldi; Michael Radulescu | | 1 |
| 2022 | Cantatas and Organ Works, Vol. 1 | Nicolaus Bruhns; Yale Institute of Sacred Music, Masaaki Suzuki | | 2 |
| — | Sämtliche Werke - Kantaten (Vol. 1) | Nicolaus Bruhns; Greta De Reyghere, James Bowman, Guy De Mey, Ian Honeyman, Max Van Egmond, Ricercar Consort | | 1 |
| — | Sämtliche Werke - Kantaten (Vol. 2) | Nicolaus Bruhns; Greta De Reyghere, James Bowman, Guy De Mey, Ian Honeyman, Max Van Egmond, Ricercar Consort | | 1 |
