| 1998 | Mša Glagolskaja (Glagolitic Mass) | Janáček; Česká filharmonie, Pražský filharmonický sbor, Drahoíira Drobková, Richard Novák, Elisabeth Söderström, František Livora, Jan Hora, Sir Charles Mackerras | | 1 |
| 1998 | Piano Concerto no. 1 in E minor, op. 11 / Grande Valse brillante in A minor, op. 34, no. 2 / Variations on "Là ci darem la mano', op. 2 | Chopin; Orchestra of the Age of Enlightenment, Sir Charles Mackerras, Emanuel Ax | | 1 |
| 1998 | Symphony no. 9 "The Great" / Symphony no. 8 "Unfinished") | Franz Schubert; Scottish Chamber Orchestra, Sir Charles Mackerras | | 1 |
| 1999 | Mary Stuart | Gaetano Donizetti, Sir Charles Mackerras; English National Opera Orchestra, Dame Janet Baker, Rosalind Plowright, David Rendall, Alan Opie, John Tomlinson | | 1 |
| 1999 | Pergolesi: Stabat Mater / Scarlatti: Stabat Mater / 6 Concerti grossi | Pergolesi, A. Scarlatti; Mirella Freni, Teresa Berganza, Ettore Gracis, Charles Mackerras | | 1 |
| 1999 | Piano Concertos K466 & K491 | Mozart; Scottish Chamber Orchestra, Sir Charles Mackerras, Alfred Brendel | | 1 |
| 1999 | Symphony No. 2 / Sea Pictures | Elgar; Royal Philharmonic Orchestra, Sir Charles Mackerras, Della Jones | | 1 |
| 1999 | Serenades no. 1 & no. 2 | Brahms; Scottish Chamber Orchestra, Sir Charles Mackerras | | 1 |
| 1999 | La traviata | Giuseppe Verdi; Valerie Masterson, John Brecknock, Christian du Plessis, English National Opera Orchestra & Chorus, Sir Charles Mackerras | | 1 |
| 1999 | Slavonic dances | Antonín Dvořák; Czech Philharmonic Orchestra, Sir Charles Mackerras | | 1 |
| 1999 | Sinfonietta / Taras Bulba / Opera Preludes | Janáček; Simon Rattle, Sir Charles Mackerras | | 1 |
| 1999 | Summer Tale / Fantastic Scherzo | Josef Suk; Czech Philharmonic Orchestra, Sir Charles Mackerras | | 1 |
| 2000 | Má vlast | Smetana; Czech Philharmonic Orchestra, Sir Charles Mackerras | | 1 |
| 2000 | Violin Concertos no. 1, op. 77 & no. 2, op. 129 | Shostakovich; David Oistrakh, Czech Philharmonic Orchestra, Evgeni Mravinsky, Jiří Tomášek, Symfonický orchestr Českého rozhlasu, Sir Charles Mackerras | | 1 |
| 2000 | Symphony no. 3 / Symphonic Dances | Sergei Rachmaninov; Royal Liverpool Philharmonic Orchestra, Sir Charles Mackerras | | 1 |
| 2000 | Symphonies 5, 8 & 9 | Franz Schubert; Orchestra of the Age of Enlightenment, Sir Charles Mackerras | | 1 |
| 2001 | Mozart | Mozart; Barbara Frittoli, Charles Mackerras, Scottish Chamber Orchestra | | 1 |
| 2001 | Piano Concertos K482 & K595 | Mozart; Scottish Chamber Orchestra, Sir Charles Mackerras, Alfred Brendel | | 1 |
| 2001 | Mary Stuart (Highlights) | Donizetti; Charles Mackerras, English National Opera Orchestra, Dame Janet Baker | | 1 |
| 2001 | Šàrka | Janáček' Urbanová, Straka, Kusnjer, Březina, Czech Philharmonic Orchestra, Sir Charles Mackerras | | 1 |
| 2002 | Symphonic Variations / Scherzo capriccioso / Legends | Dvořák; Czech Philharmonic Orchestra, Sir Charles Mackerras | | 1 |
| 2002 | Symphony no. 4 / A Midsummer Night's Dream | Mendelssohn; Orchestra of the Age of Enlightenment, Sir Charles Mackerras | | 1 |
| 2002 | Piano Concertos K. 271 "Jeunehomme" & K. 503 | Mozart; Scottish Chamber Orchestra, Sir Charles Mackerras, Alfred Brendel | | 1 |
| 2002 | Idomeneo | Mozart; Ian Bostridge, Lorraine Hunt Lieberson, Lisa Milne, Barbara Frittoli, Anthony Rolfe Johnson, Edinburgh Festival Chorus, Scottish Chamber Orchestra, Charles Mackerras | | 1 |
| 2002 | Paris / Double Concerto / Cello Concerto | Delius; Tasmin Little, Raphael Wallfisch, Sir Charles Mackerras, Royal Liverpool Philharmonic Orchestra | | 1 |
| 2003 | Symphony nos. 7-9 & 31 / The Tinker's Wedding | Havergal Brian; Royal Liverpool Philharmonic Orchestra, Sir Charles Mackerras, Sir Charles Groves | | 1 |
| 2003 | Requiem / Adagio & Fugue | Wolfgang Amadeus Mozart; Scottish Chamber Orchestra, Sir Charles Mackerras | | 1 |
| 2004 | Bartok: Music for Strings, Percussion and Celeste / Bartok: Divertimento / Kodaly: Dances of Galanta | Béla Bartók, Zoltán Kodály; Scottish Chamber Orchestra, Sir Charles Mackerras | | 1 |
| 2004 | Britten Conducts Britten: Operas II: A Midsummer Night's Dream / The Rape Of Lucretia / The Turn Of The Screw / Bedford: Death In Venice / Mackerras: Gloriana | Benjamin Britten; Steuart Bedford, Charles Mackerras | | 1 |
| 2004 | Bartok & Kodaly | Scottish Chamber Orchestra, Sir Charles Mackerras | | 1 |
| 2004 | Symphony no. 6 / The Golden Spinning Wheel | Dvořák; Czech Philharmonic Orchestra, Sir Charles Mackerras | | 1 |
| 2004 | Sir Charles Mackerras Conducts Janáček | Leoš Janáček; Czech Philharmonic Orchestra, Sir Charles Mackerras | | 1 |
| 2005 | Flute and Harp Concerto | Wolfgang Amadeus Mozart; Jonathan Snowden; London Philharmonic Orchestra, Sir Charles Mackerras, Andrew Litton | | 1 |
| 2005 | BBC Music, Volume 13, Number 7: Symphony no. 6 | Gustav Mahler; BBC Philharmonic, Sir Charles Mackerras | | 1 |
| 2005 | Symphonies Nos. 8, 9 | Antonín Dvořák; Prague Symphony Orchestra, Sir Charles Mackerras | | 1 |
| 2005 | Symphony Nos. 9 "New World", 8 | Dvořák; London Philharmonic Orchestra, Sir Charles Mackerras | | 1 |
| 2005 | The Bartered Bride | Bedřich Smetana; Philharmonic Orchestra, Sir Charles Mackerras, Neal Davies, Yvonne Howard, Susan Gritton, Paul Charles Clarke, Timothy Robinson, Peter Rose, Chorus of the Royal Opera House, Covent Garden | | 1 |
| 2006 | Messiah | G.F. Handel arr. W.A. Mozart; Lott, Palmer, Langridge, Lloyd, The Huddersfield Choral Society, Royal Philharmonic Orchestra, Sir Charles Mackerras | | 1 |
| 2006 | Tutto Mozart! | Bryn Terfel, Scottish Chamber Orchestra, Charles Mackerras | | 4 |
| 2006 | Horn Concerti | Mozart; Eric Ruske, Scottish Chamber Orchestra, Charles Mackerras | | 1 |
| 2006 | La clemenza di Tito | Mozart; Magdalena Kožená, Rainer Trost, Hillevi Martinpelto, Scottish Chamber Orchestra, Sir Charles Mackerras | | 1 |
| 2006 | Mozart - The Great Operas | Wolfgang Amadeus Mozart, Charles Mackerras & Scottish Chamber Orchestra | | 5 |
| 2006 | Piano Concertos K414 & K453 | Mozart; Scottish Chamber Orchestra, Sir Charles Mackerras, Alfred Brendel | | 1 |
| 2007 | Hansel and Gretel | Engelbert Humperdinck, Philharmonia Orchestra, New London Children's Choir & Sir Charles Mackerras | | 1 |
| 2008 | Symphonies 38 - 41 | Wolfgang Amadeus Mozart; Scottish Chamber Orchestra, Sir Charles Mackerras | | 2 |
| 2008 | Salome | Richard Strauss; Susan Bullock, Sally Burgess, John Graham-Hall, John Wegner, Philharmonia Orchestra, Sir Charles Mackerras | | 1 |
| 2008 | Mozart: Cosi fan tutte | Wolfgang Amadeus Mozart; Charles Mackerras, Orchestra of the Age of Enlightenment, Christopher Maltman, Lesley Garrett, Diana Montague, Sir Thomas Allen, Toby Spence, Janice Watson | | 1 |
| 2009 | Piano Concertos 3, 4 & 5 | Ludwig van Beethoven; Scottish Chamber Orchestra, Sir Charles Mackerras, Artur Pizarro | | 3 |
| 2009 | Three fragments from the opera Juliette | Bohuslav Martinů, Charles Mackerras, Česká filharmonie, Magdalena Kožená, Steve Davislim | | 1 |
| 2009 | Sylvia | Léo Delibes, Jean-Baptiste Mari, Orchestre de l’Opéra national de Paris, Charles Mackerras, Orchestra of the Royal Opera House, Covent Garden, John Lanchbery & Sydney Symphony Orchestra | | 1 |
| 2010 | Symphonic Poems | Dvořák; Sir Charles Mackerras, Czech Philharmonic Orchestra | | 2 |
| 2010 | Symphonies 29, 31 "Paris", 32, 35 "Haffner" & 36 "Linz" | Wolfgang Amadeus Mozart; Scottish Chamber Orchestra, Sir Charles Mackerras | | 2 |
| 2011 | Tchaikovsky Symphony No. 6 | Charles Mackerras | | 1 |
| 2013 | Gloriana | Britten; Josephine Barstow, Della Jones, Yvonne Kenny, Philip Langridge, Orchestra and Chorus of the Welsh National Opera, Alan Opie, Jonathan Summers, Charles Mackerras | | 1 |
| 2017 | Sinfonietta / Taras Bulba | Leoš Janáček; Wiener Philharmoniker, Sir Charles Mackerras | | 1 |
| 2021 | Kaleidoscope: An Orchestral Extravaganza | Sir Charles Mackerras | | 1 |
| 2022 | Pictures at an Exhibition, Dawn on the Moskva River | Modest Mussorgsky; Charles Mackerras, New Philharmonia Orchestra | | 1 |
| 2023 | BBC Music, Volume 32, Number 4: Symphonic Landscapes | Mozart, Brahms, Schubert, Mendelssohn; Scottish Chamber Orchestra, Francesco Piemontesi, Joseph Swensen, Charles Mackerras, Andrew Manze, Robin Ticciati, Maxim Emelyanychev | | 1 |
| — | Concerti Grossi Op.3 | George Frideric Handel, Charles Mackerras & Prague Chamber Orchestra | | 1 |
| — | Enigma Variations / Falstaff Symphonic Study | Elgar; London Philharmonic Orchestra, Charles Mackerras | | 1 |
| — | Flute Concertos | C.P.E. Bach, Hoffmeister; Ingrid Dingfelder, English Chamber Orchestra, Sir Charles Mackerras | | 1 |
| — | Le Nozze di Figaro: Highlights | Mozart; Charles Mackerras, Scottish Chamber Orchestra, Scottish Chamber Chorus | | 1 |
| — | Music for the Royal Fireworks | Handel; Sir Charles Mackerras | | 1 |
| — | Ode On St. Cecilia's Day (1692) | Henry Purcell; Simon Woolf, Paul Esswood, Roland Tatnell, Alexander Young, Michael Rippon, Shirley-Quirk, Tiffin Choir, Ambrosian Singers, English Chamber Orchestra, Charles Mackerras | | 1 |
| — | Ode on St. Cecilia's Day / The Married Beau | Henry Purcell; English Chamber Orchestra, Charles Mackerras, Festival Strings Lucerne, Rudolf Baumgartner | | 1 |
| — | Sea Drift / Florida Suite | Delius; Orchestra of the Welsh National Opera, Chorus of the Welsh National Opera, Sir Charles Mackerras, Thomas Hampson | | 1 |
| — | The Rite of Spring / Petrushka | Stravinsky; Sir Charles Mackerras, Simon Rattle | | 1 |
